Publications

2022
Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids
Jocelyn Plassais, Bridgett M. von Holdt, Heidi G. Parker, Alberto Carmagnini, Nicolas Dubos, Ilenia Papa, Kevin Bevant, Thomas Derrien, Lauren M. Hennelly, D.Thad Whitaker, Alex C. Harris, Andrew N. Hogan, Heather J. Huson, Victor F. Zaibert, Anna Linderholm, James Haile, Thierry Fest, Bilal Habib, Benjamin N. Sacks, Norbert Benecke, Alan K. Outram, Mikhail V. Sablin, Mietje Germonpré, Greger Larson, Laurent Frantz, and Elaine A. Ostrander
Current Biology 32, 1–9
2022
Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history
He Yu, Alexandra Jamieson, Ardern Hulme-Beaman, Chris J. Conroy, Becky Knight, Camilla Speller, Hiba Al-Jarah, Heidi Eager, Alexandra Trinks, Gamini Adikari, Henriette Baron, Beate Böhlendorf-Arslan, Wijerathne Bohingamuwa, Alison Crowther, Thomas Cucchi, Kinie Esser, Jeffrey Fleisher, Louisa Gidney, Elena Gladilina, Pavel Gol’din, Steven M. Goodman, Sheila Hamilton-Dyer, Richard Helm, Jesse C. Hillman, Nabil Kallala, Hanna Kivikero, Zsófia E. Kovács, Günther Karl Kunst, René Kyselý, Anna Linderholm, Boutheina Maraoui-Telmini ́, Nemanja Marković, Arturo Morales-Muñiz, Mariana Nabais, Terry O’Connor, Tarek Oueslati, Eréndira M. Quintana Morales, Kerstin Pasda, Jude Perera, Nimal Perera, Silvia Radbauer, Joan Ramon, Eve Rannamäe, Joan Sanmartí Grego, Edward Treasure, Silvia Valenzuela-Lamas, Inge van der Jagt, Wim Van Neer, Jean-Denis Vigne, Thomas Walker, Stephanie Wynne-Jones, Jørn Zeiler, Keith Dobney, Nicole Boivin, Jeremy B. Searle, Ben Krause-Kyora, Johannes Krause, Greger Larson, David Orton
Nature Communications 13:2399
2022
Reconstructing the history of helminth prevalence in the UK
Hannah Ryan, Patrik G Flammer, Rebecca Nicholson, Louise Loe, Ben Reeves, Enid Allison, Christopher Guy, Ines Lopez Doriga, Tony Waldron, Don Walker, Claas Kirchhelle, Greger Larson, Adrian L Smith
PLOS Neglected Tropical Diseases 16(4): e0010312
2021
Ancient genomes reveal structural shifts after the arrival of Steppe-related ancestry in the Italian Peninsula
Tina Saupe, Francesco Montinaro, Cinzia Scaggion, Nicola Carrara, Toomas Kivisild, Eugenia D’Atanasio, Ruoyun Hui, Anu Solnik, Ophelie Lebrasseur, Greger Larson, Luca Alessandri, Ilenia Arienzo, Flavio De Angelis, Mario Federico Rolfo, Robin Skeates, Letizia Silvestri, Jessica Beckett, Sahra Talamo, Andrea Dolfini, Monica Miari, Mait Metspalu, Stefano Benazzi, Cristian Capelli, Luca Pagani, and Christiana L. Scheib
Current Biology 31, 1–16
2021
Biology’s Best Friend: Bridging Disciplinary Gaps to Advance Canine Science
Caleb M. Bryce, Michael S. Davis, Matthew E. Gompper, Aimee Hurt, Jeremy M. Koster, Greger Larson, Elaine A. Ostrander, Monique A. R. Udell, Silvan Urfer, Aaron J. Wirsing and Ana G. Jimenez
Integrative and Comparative Biology 61(1): 76–92
2021
Dire wolves were the last of an ancient New World canid lineage
Angela R. Perri, Kieren J. Mitchell, Alice Mouton, Sandra Álvarez-Carretero, Ardern Hulme-Beaman, James Haile, Alexandra Jamieson, Julie Meachen, Audrey T. Lin, Blaine W. Schubert, Carly Ameen, Ekaterina E. Antipina, Pere Bover, Selina Brace, Alberto Carmagnini, Christian Carøe, Jose A. Samaniego Castruita, James C. Chatters, Keith Dobney, Mario dos Reis, Allowen Evin, Philippe Gaubert, Shyam Gopalakrishnan, Graham Gower, Holly Heiniger, Kristofer M. Helgen, Josh Kapp, Pavel A. Kosintsev, Anna Linderholm, Andrew T. Ozga, Samantha Presslee, Alexander T. Salis, Nedda F. Saremi, Colin Shew, Katherine Skerry, Dmitry E. Taranenko, Mary Thompson, Mikhail V. Sablin, Yaroslav V. Kuzmin, Matthew J. Collins, Mikkel-Holger S. Sinding, M. Thomas P. Gilbert, Anne C. Stone, Beth Shapiro, Blaire Van Valkenburgh, Robert K. Wayne, Greger Larson, Alan Cooper and Laurent A. F. Frantz
Nature
2021
Dog domestication and the dual dispersal of people and dogs into the Americas
Angela R. Perri,Tatiana R. Feuerborn, Laurent A. F. Frantz, Greger Larson, Ripan S. Malhi, David J. Meltzer, and Kelsey E. Witt
Proceedings of the National Academy of Sciences 118 (6): e2010083118
2021
Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos
Mikkel-Holger S. Sinding, Marta M. Ciucani, Jazmín Ramos-Madrigal, Alberto Carmagnini, Jacob Agerbo Rasmussen, Shaohong Feng, Guangji Chen, Filipe G. Vieira, Valeria Mattiangeli, Rajinder K. Ganjoo, Greger Larson, Thomas Sicheritz-Pontén, Bent Petersen, Laurent Frantz, M. Thomas P. Gilbert, and Daniel G. Bradley
iScience 24, 103226
2021
Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal
Tatiana R. Feuerborn, Alberto Carmagnini, Robert J. Losey, Tatiana Nomokonova, Arthur Askeyev, Igor Askeyev, Oleg Askeyev, Ekaterina E. Antipina, Martin Appelt, Olga P. Bachura, Fiona Beglane, Daniel G. Bradley, Kevin G. Daly, Shyam Gopalakrishnan, Kristian Murphy Gregersen, Chunxue Guo, Andrei V. Gusev, Carleton Jones, Pavel A. Kosintsev, Yaroslav V. Kuzmin, Valeria Mattiangeli, Angela R. Perri, Andrei V. Plekhanov, Jazmín Ramos-Madrigal, Anne Lisbeth Schmidt, Dilyara Shaymuratova, Oliver Smith, Lilia V. Yavorskaya, Guojie Zhang, Eske Willerslev, Morten Meldgaard, M. Thomas P. Gilbert, Greger Larson, Love Dalén, Anders J. Hansen, Mikkel-Holger S. Sinding, and Laurent Frantz
PNAS 118(39): e2100338118
2021
Population genomic, olfactory, dietary, and gut microbiota analyses demonstrate the unique evolutionary trajectory of feral pigs
Simona Petrelli, Maria Buglione, Valeria Maselli, Claudia Troiano, Greger Larson, Laurent Frantz, Aurelie Manin, Ezio Ricca, Loredana Baccigalupi, Dominic Wright, Christian Pietri, Domenico Fulgione
Molecular Ecology 00:1–18
2021
Reconsidering domestication from a process archaeology perspective
Amy Bogaard, Robin Allaby, Benjamin S. Arbuckle, Robin Bendrey, Sarah Crowley, Thomas Cucchi, Tim Denham, Laurent Frantz, Dorian Fuller, Tom Gilbert, Elinor Karlsson, Aurélie Manin, Fiona Marshall, Natalie Mueller, Joris Peters, Charles Stépanoff, Alexander Weide & Greger Larson
World Archaeology, DOI: 10.1080/00438243.2021.1954990
2021
The question of canine origins
Greger Larson
Science, 374 (6567)
2020
863 genomes reveal the origin and domestication of chicken
Ming-Shan Wang, Mukesh Thakur, Min-Sheng Peng, Yu Jiang, Laurent Alain François Frantz, Ming Li, Jin-Jin Zhang, Sheng Wang, Joris Peters, Newton Otieno Otecko, Chatmongkon Suwannapoom, Xing Guo, Zhu-Qing Zheng, Ali Esmailizadeh, Nalini Yasoda Hirimuthugoda, Hidayat Ashari, Sri Suladari, Moch Syamsul Arifin Zein, Szilvia Kusza, Saeed Sohrabi, Hamed Kharrati-Koopaee, Quan-Kuan Shen, Lin Zeng, Min-Min Yang, Ya-Jiang Wu, Xing-Yan Yang, Xue-Mei Lu, Xin-Zheng Jia, Qing-Hua Nie, Susan Joy Lamont, Emiliano Lasagna, Simone Ceccobelli, Humpita Gamaralalage Thilini Nisanka Gunwardana, Thilina Madusanka Senasige, Shao-Hong Feng, Jing-Fang Si, Hao Zhang, Jie-Qiong Jin, Ming-Li Li, Yan-Hu Liu, Hong-Man Chen, Cheng Ma, Shan-Shan Dai, Abul Kashem Fazlul Haque Bhuiyan, Muhammad Sajjad Khan, Gamamada Liyanage Lalanie Pradeepa Silva, Thi-Thuy Le, Okeyo Ally Mwai, Mohamed Nawaz Mohamed Ibrahim, Megan Supple, Beth Shapiro, Olivier Hanotte, Guojie Zhang, Greger Larson, Jian-Lin Han, Dong-Dong Wu and Ya-Ping Zhang
Cell Research (2020) 0:1–9
2020
A mitochondrial genetic divergence proxy predicts the reproductive compatibility of mammalian hybrids
Richard Allen, Hannah Ryan, Brian W. Davis, Charlotte King, Laurent Frantz, Evan Irving-Pease, Ross Barnett, Anna Linderholm, Liisa Loog, James Haile, Ophélie Lebrasseur, Mark White, Andrew C. Kitchener, William J. Murphy and Greger Larson
Proceedings of the Royal Society B 287: 20200690.
2020
Animal domestication in the era of ancient genomics
Laurent A. F. Frantz, Daniel G. Bradley, Greger Larson and Ludovic Orlando
Nature Reviews Genetics
2020
Arctic-adapted dogs emerged at the Pleistocene–Holocene transition
Mikkel-Holger S. Sinding, Shyam Gopalakrishnan, Jazmín Ramos-Madrigal, Marc de Manuel, Vladimir V. Pitulko, Lukas Kuderna, Tatiana R. Feuerborn, Laurent A. F. Frantz, Filipe G. Vieira, Jonas Niemann, Jose A. Samaniego Castruita, Christian Carøe, Emilie U. Andersen-Ranberg, Peter D. Jordan, Elena Y. Pavlova, Pavel A. Nikolskiy, Aleksei K. Kasparov, Varvara V. Ivanova, Eske Willerslev, Pontus Skoglund, Merete Fredholm, Sanne Eline Wennerberg, Mads Peter Heide-Jørgensen, Rune Dietz, Christian Sonne, Morten Meldgaard, Love Dalén, Greger Larson, Bent Petersen, Thomas Sicheritz-Pontén, Lutz Bachmann, Øystein Wiig,Tomas Marques-Bonet, Anders J. Hansen, M. Thomas P. Gilbert
Science 368: 1495–1499
2020
Brain Size Does Not Rescue Domestication Syndrome
Kathryn A. Lord, Greger Larson, and Elinor K. Karlsson
Trends in Ecology and Evolution, 2763
2020
Building three-dimensional models before destructive sampling of bioarchaeological remains: a comment to Palsdottir et al. (2019)
Allowen Evin, Renaud Lebrun, Marine Durocher, Carly Ameen, Greger Larson and Naomi Sykes
Royal Society Open Science 7: 192034
2020
Epidemiological insights from a large-scale investigation of intestinal helminths in Medieval Europe
Patrik G. Flammer, Hannah Ryan, Stephen G. Preston, Sylvia Warren, Rena´ta Přichystalova´, Rainer Weiss, Valerie Palmowski, Sonja Boschert, Katarina Fellgiebel, Isabelle Jasch-Boley, Madita-Sophie Kairies, Ernst Ru¨mmele, Dirk Rieger, Beate Schmid, Ben Reeves, Rebecca Nicholson, Louise Loe, Christopher Guy, Tony Waldron, Jiř´ı Macha´ček, Joachim Wahl, Mark Pollard, Greger Larson, Adrian L. Smith
PLoS Neglected Tropical Diseases 14(8): e0008600
2020
Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
Jazmı´n Ramos-Madrigal, Mikkel-Holger S. Sinding, Christian Carøe, Sarah S.T. Mak, Jonas Niemann, Jose A. Samaniego Castruita, Sergey Fedorov, Alexander Kandyba, Mietje Germonpre, Herve Bocherens, Tatiana R. Feuerborn, Vladimir V. Pitulko, Elena Y. Pavlova, Pavel A. Nikolskiy, Aleksei K. Kasparov, Varvara V. Ivanova, Greger Larson, Laurent A.F. Frantz, Eske Willerslev, Morten Meldgaard, Bent Petersen, Thomas Sicheritz-Ponten, Lutz Bachmann, Øystein Wiig, Anders J. Hansen, M. Thomas P. Gilbert, and Shyam Gopalakrishnan
Current Biology 31, 1–9
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